2017 Chevy Tahoe P0340 P0314

My shop replaced the engine for a 2017 Chevy Tahoe 5.3 with a rebuilt Jasper with AFM delete. The truck is now storing a code P0340 and P0341 for the CMP sensor. I checked for 5V reference, ground, and scoped the signal. The ref circuit checked good and the ground checked good with a test light. The scope image of the signal circuit showed a shark fin waveform switching from 3V to ground with no drop outs. I swapped the CMP with an OEM sensor and I'm getting the same code and same scope image. Is it possible to have a tone wheel issue with the CMP causing the funky shark fin waveform instead of a clean square wave? Possibly the timing cover isn't aligned properly causing an air gap issue? Has anyone else ran into this? CMP DSO Image  Please see the attached Scope Image. 

so your old 5.3 had AFM ? DID YOU program your ECM for new delete ?

Yeah Jasper sends you a HP tuner with the new engine.

I agree with you, that waveform is suspect looking.
I think an inspection and comparison of the camshaft reluctor to the original part is justified.